CDS

Accession Number TCMCG017C04327
gbkey CDS
Protein Id OMP09080.1
Location complement(join(6759..6790,7187..7386,7472..7567,7809..8134,8234..8345,8605..8678))
Organism Corchorus olitorius
locus_tag COLO4_05825

Protein

Length 279aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012471.1
Definition E3 ubiquitin-protein ligase RHF1A [Corchorus olitorius]
Locus_tag COLO4_05825

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K19043        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0055046        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATATCATCTTCAATGCATTCTTGAATGGTAGGCTGTCTTCTCACATATTTTTGCCTAGGATCGCAATAATCCAAGAGCTTTTGGATGCTGTCAGAATTGAAAGGCATCGCAGGTCAAGGAACACTACTCCTGCTGTGCCCAGAGACTTTCATCATTTTGATGATGACTTTGGTGCTGAGGAGGATGCATCTCATTCAGATGACTCCGACTTTGATGAACGCATTTTGCAGCATCTAGCTGCTGCTGCAAGTAGAGCTCGTTATGTTCACAGAAGGGAGAGGCAAAGAGCTTCTGAAGTTCTTTTTTTCACTTCCCCTGAACATATGGCACGCATGCAGCAGACACATCCAACTTCACCAGAAGAAATCTCTAGTTATGGGTCAACCCAGTGTGATTCACCGGTTTCAATTATACCATCAATTAGCACTGACCCTTCGTCACCTGCAACCCCAACTGTTGACGTTGTCTCCACTGCTGCTGCCAGTGGAAATAAGGCTATCAAACCAAGGCAACTGCAAGCAGATACCCCACATAGACCAAGCTCATCTGAAACATTATCTTTCTCAGAGTCTATCAAATCTAAATGGTCCACTGCTTCAGCAAGATACAAGGAATCGATTTTTAAAGGTACCAGAGGTCTAAAAGAGAAGCTTCTTGCTCGTAATAACTCTGTTAAGGAGCTCAGCAAGGGAGTGCAGCGTGAGATGAGTGCAGGGATTGCTGGTGTAGCAAAAATGATTGAGCGCCTAGATATTGCAACAAAAAGACCCGGAGCTTCTGTACCTGTATCTGGTGGAGCTGGGGAGAGGACACTGATGCTGCTGGCTAAGTATTAA
Protein:  
MNIIFNAFLNGRLSSHIFLPRIAIIQELLDAVRIERHRRSRNTTPAVPRDFHHFDDDFGAEEDASHSDDSDFDERILQHLAAAASRARYVHRRERQRASEVLFFTSPEHMARMQQTHPTSPEEISSYGSTQCDSPVSIIPSISTDPSSPATPTVDVVSTAAASGNKAIKPRQLQADTPHRPSSSETLSFSESIKSKWSTASARYKESIFKGTRGLKEKLLARNNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASVPVSGGAGERTLMLLAKY